A selection of journal articles written by faculty in the College of the Pacific - Department of Biological Sciences at University of the Pacific.

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Submissions from 2013

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Di- and Trinuclear Ruthenium‑, Rhodium‑, and Iridium- Functionalized Pyridyl Aromatic Ethers: A New Class of Antiparasitic Agents, Prinessa Chellan, Kirkwood M. Land, Ajit Shokar, Aaron Au, Seung Hwan An, Dale Taylor, Peter J. Smith, Kelly Chibale, and Gregory S. Smith

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Cryptic genetic and wing pattern diversity in a mimetic Heliconius butterfly, Ryan I. Hill, L. Gilbert, and M. Kronforst

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Basic biology of Trichomonas vaginalis: current explorations and future directions, Kirkwood M. Land and Lisa A. Wrischnik

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Mutant strains of Pichia pastoris with enhanced secretion of recombinant proteins, Sasha Larsen, Jun Weaver, Katherine de Sa Campos, Rhobe Bulahan, Jackson Nguyen, Heather Grove, Amy Huang, Lauren Low, Namphuong Tran, Seth Gomez, Jennifer Yau, Thomas Ilustrisimo, Jessica Kawilarang, Jonathan Lau, Maivi Tranphung, Irene Chen, Christina Tran, Marcia Fox, Joan Lin-Cereghino, and Geoff P. Lin-Cereghino

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The effect of α-mating factor secretion signal mutations on recombinant protein expression in Pichia pastoris., Geoff P. Lin-Cereghino, Carolyn Stark, Daniel Kim, Jennifer Chang, Nadia Shaheen, Hansel Poerwanto, Kimiko Agari, Pachai Moua, Lauren Low, Namphuong Tran, Amy Huang, Maria Nattestad, Kristin Oshiro, John Chang, Archana Chavan, Jerry Tsai, and Joan Lin-Cereghino

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A cysteine protease inhibitor rescues mice from a lethal Cryptosporidium parvum infection, Momar Ndao, Milli Nath-Chowdhury, Mohammed Sajid, Victoria Marcus, Susan T. Mashiyama, Judy Sakanari, Erik Chow, Zachary Mackey, Kirkwood M. Land, Matthew P. Jacobson, Chakrapani Kalyanaraman, James H. McKerrow, Michael J. Arrowwood, and Conor R. Caffrey

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Design and synthesis of b-amino alcohol based b-lactam-isatin chimeras and preliminary analysis of in vitro activity against the protozoal pathogen Trichomonas vaginalis, Nisha, Vishu Mehra, Melissa Hopper, Neal Patel, Dominique Hall, Lisa A. Wrischnik, Kirkwood M. Land, and Vipan Kumar

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Synthesis of 1H-1,2,3-triazole linked β–lactam-Isatin Bifunctional Hybrids and preliminary analysis of in vitro activity against the protozoal parasite Trichomonas vaginalis, Raghu Raj, Pardeep Singh, Nathan T. Haberkern, Ryan M. Faucher, Neal Patel, Kirkwood M. Land, and Vipan Kumar

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Synthesis, characterization, antiparasitic and cytotoxic evaluation of thioureas conjugated to polyamine scaffolds, Tameryn Stringer, Dale Taylor, Carmen de Kock, Hajira Guzgay, Aaron Au, Seung Hwan An, Benjamin Sanchez, Raquel O'Connor, Neal Patel, Kirkwood M. Land, Peter J. Smith, Denver T. Hendricks, Timothy J. Egan, and Gregory S. Smith

Submissions from 2012

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Exploring the Versatility of Cycloplatinated Thiosemicarbazones as Antitumor and Antiparasitic Agents, Prinessa Chellan, Kirkwood M. Land, Ajit Shokar, Aaron Au, Seung Hwan An, Catherine M. Clavel, Paul J. Dyson, Carmen de Kock, Peter J. Smith, Kelly Chibale, and Gregory S. Smith

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Conserved C-terminal domain of spider tubuliform spidroin 1 contributes to extensibility in synthetic fibers, Eric Gnesa, Yang Hsia, Jeffery Yarger, Warner Weber, Joan Lin-Cereghino, Geoff P. Lin-Cereghino, Simon Tang, Kimiko Agari, and Craig Vierra

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Ecologically relevant cryptic species in the highly polymorphic Amazonian butterfly Mechanitis mazaeus s.l. (Lepidoptera: Nymphalidae; Ithomiini), Ryan I. Hill, Marianne Elias, Kanchon Dasmahapatra, Chris Jiggins, Victor Koong, Keith Willmott, and James Mallet

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Diversification of complex butterfly wing patterns by repeated regulatory evolution of a Wnt ligand, Arnaud Martin, Riccardo Papa, Nicola Nadeau, Ryan I. Hill, Brian Counterman, Georg Halder, Chris Jiggins, Marcus Kronforst, Anthony Long, W. McMillan, and Robert Reed

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Adenosylhomocysteine hydrolase of the protozoan parasite Trichomonas vaginalis: Potent inhibitory activity of 9-(2-deoxy-2-fluoro-β, D-arabinofuranosyl) adenine, Ajit Shokar, Aaron Au, Seung Hwan An, Elsie Tong, Gabriel Garza, Jessica Zayas, Stanislaw F. Wnuk, and Kirkwood M. Land

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Analysis of the 5' untranslated region (5'UTR) of the alcohol oxidase 1 (AOX1) gene in recombinant protein expression in Pichia pastoris, Chris A. Staley, Amy Huang, Maria Nattestad, Kristin T. Oshiro, Laura E. Ray, Tejas Mulye, Zhiguo Harry Li, Thu Le, Justin J. Stephens, Seth R. Gomez, Allison D. Moy, Jackson C. Nguyen, Andreas H. Franz, Joan Lin-Cereghino, and Geoff P. Lin-Cereghino

Submissions from 2011

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Comparative population genetics of a mimicry locus among hybridizing Heliconius butterfly species, N. L. Chamberlain, Ryan I. Hill, S. W. Baxter, C. D. Jiggins, and M. R. Kronforst

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Synthesis and in vitro Evaluation of Palladium (II) Salicylaldiminato Thiosemicarbazone Complexes Against Trichomonas vaginalis, Prinessa Chellan, Tameryn Stinger, Ajit Shokar, Padraick J. Dornbush, Guillermo Vazquez-Anaya, Kirkwood M. Land, Kelly Chibale, and Gregory S. Smith

Submissions from 2010

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Mitochondrial DNA barcoding detects some species that are real, and some that are not, Kanchon K. Dasmahapatra, Marianne Elias, Ryan I. Hill, Joseph I. Hoffman, and James Mallet

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Vertical distribution, flight behavior, and evolution of wing morphology in Morpho butterflies, P. J. DeVries, Carla M. Penz, and Ryan I. Hill

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Preliminary Studies of 3,4-Dichloroaniline Amides as Antiparasitic Agents: Structure Activity Analysis of a Compound Library in vitro Against Trichomonas vaginalis, Padraik J. Dornbush, Cynric H. Cho, Elizabeth Chang, Xu Lu, Wade A. Russu, Lisa A. Wrischnik, and Kirkwood M. Land

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AldoHcy Hydrolase of Trichomonas vaginalis: Studies of the effects of 5'-deoxy-5'-(iodomethylene) adenosine and related 6-N-cyclopropyladenosine analogues on in vitro culture, Padraik J. Dornbush, Guillermo Vazquez-Anaya, Ajit Shokar, Saoly Benson, Magdelena Rapp, Stanislaw F. Wnuk, Lisa A. Wrischnik, and Kirkwood M. Land

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Habitat segregation among mimetic ithomiine butterflies (Nymphalidae), Ryan I. Hill

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Secretion and proteolysis of heterologous proteins fused to the Escherichia coli maltose binding protein, Zhiguo Li, Wilson Leung, Amy Yon, John Nguyen, Vincent C. Perez, Jane Vu, William Giang, Linda T. Luong, Tracy Phan, Kate A. Salazar, Seth R. Gomez, Colin Au, Fan Xiang, David W. Thomas, Andreas H. Franz, Joan Lin-Cereghino, and Geoff P. Lin-Cereghino

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Secretion and proteolysis of heterologous proteins fused to the Escherichia coli maltose binding protein in Pichia pastoris., Zhiguo Li, Wilson Leung, Amy Yon, John Nguyen, Vincent Perez, Jane Vu, William Giang, Linda Luong, Tracy Phan, Katherine Salazar, Seth Gomez, Colin Au, Fan Xiang, David Thomas, Andreas H. Franz, Joan Lin-Cereghino, and Geoff P. Lin-Cereghino

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An improved method for enhanced production and biological activity of human secretory leukocyte protease inhibitor (SLPI) in Pichia pastoris, Zhiguo Li, Allison Moy, Seth R. Gomez, Andreas H. Franz, Joan Lin-Cereghino, and Geoff P. Lin-Cereghino

Submissions from 2009

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Polymorphic butterfly reveals the missing link in ecological speciation, N. L. Chamberlain, Ryan I. Hill, L. E. Gilbert, D. D. Kapan, and M. R. Kronforst

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The immature stages and natural history of Veladyris pardalis (Salvin, 1869) in eastern Ecuador (Lepidoptera, Nymphalidae, Ithomiinae), H. F. Greeney, Ryan I. Hill, M. R. Hualinga, W. R. Simbana, and G. Gentry

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Expression and characterization of recombinant human secretory leukocyte protease inhibitor (SLPI) protein from Pichia pastoris, Zhiguo Li, Allison Moy, Kirti Sohal, Carolyn Dam, Peter Kuo, James Whittaker, Mei Whittaker, Nejat Düzgünes, Krystyna Konopka, Andreas H. Franz, Joan Lin-Cereghino, and Geoff P. Lin-Cereghino

Submissions from 2008

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Promoter library designed for fine-tuned gene expression in Pichia pastoris, Franz S. Hartner, Claudia Ruth, David Langenegger, Sabrina N. Johnson, Petr Hyka, Geoff P. Lin-Cereghino, Joan Lin-Cereghino, Karin Kovar, James Cregg, and Anton Glieder

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Description of the immature stages of Methona confusa confusa Butler, 1873 and Methona curvifascia Weymer, 1883 (Nymphalidae, Ithomiinae) from eastern Ecuador, Ryan I. Hill and Luis A. Tipan

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Direct selection of Pichia pastoris expression strains using new G418 resistance vectors, Joan Lin-Cereghino, Matthew Hashimoto, Allison Moy, James Castelo, Claire Orazem, Peter Kuo, See Xiong, Vishal Gandhi, Christopher Hatae, Alex Chan, and Geoff P. Lin-Cereghino

Submissions from 2007

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Limited performance of DNA barcoding in a diverse community of tropical butterflies, Marianne Elias, Ryan I. Hill, Keith R. Willmott, Kanchon K. Dasmahapatra, Andrew V. Z. Brower, James Mallet, and Chris D. Jiggins

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Vectors and strains for expression., Joan Lin-Cereghino and Geoff P. Lin-Cereghino

Submissions from 2006

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Life history and biology of Forbestra olivencia (Ithomiinae, Nymphalidae), Ryan I. Hill

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Opportunities for research at field stations in Ecuador, Ryan I. Hill

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Mxr1p, a Key Regulator of the Methanol Utilization Pathway and Peroxisomal Genes in Pichia pastoris, Geoff P. Lin-Cereghino, Laurie Godfrey, Bernard J. de la Cruz, Sabrina Johnson, Samone Khuongsathiene, Ilya Tolstorukov, Mingda Yan, Joan Lin-Cereghino, Marten Veenhuis, Suresh Subramani, and James Cregg

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Preparation of the Yeast Pichia pastoris for Transmission Electron Microscopy., Benjamin Yount, Joan Lin-Cereghino, Geoff P. Lin-Cereghino, and Marcia Fox

Submissions from 2005

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Diet: Charina bottae, T. J. Devitt, Ryan I. Hill, and S. E. Cameron

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Condensed protocol for competent cell preparation and transformation of the methylotrophic yeast Pichia pastoris, Joan Lin-Cereghino, William Wong, See Xiong, William Giang, Linda Luong, Jane Vu, Sabrina Johnson, and Geoff P. Lin-Cereghino

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Cloning and characterization of the Pichia pastoris MET2 gene as a selectable marker, Der Thor, See Xiong, Claire C. Orazem, An-Chun Kwan, James Cregg, Joan Lin-Cereghino, and Geoff P. Lin-Cereghino

Submissions from 2004

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Differential wing strength in Pierella butterflies (Nymphalidae, Satyrinae) supports the deflection hypothesis, Ryan I. Hill and Jarol F. Vaca

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Temperature-dependent oxygen limitation in insect eggs, H. Arthur Woods and Ryan I. Hill

Submissions from 2003

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Notes on the life history of Asterope markii Hewitson, 1857 (Nymphalidae), Ryan I. Hill

Submissions from 2002

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Phylogenetic analysis and review of Panacea and Batesia butterflies (Nymphalidae), Ryan I. Hill, Carla M. Penz, and P. J. DeVries

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Production of recombinant proteins in fermenter cultures of the yeast Pichia pastoris, Geoff P. Lin-Cereghino, Joan Lin-Cereghino, Christine Ilgen, and James Cregg

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Expression of Foreign Genes in the yeast Pichia pastoris, Geoff P. Lin-Cereghino, Anthony Sunga, Joan Lin-Cereghino, and James Cregg

Submissions from 2001

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Pichia pastoris Pex14p, a phosphorylated peroxisomal membrane protein, is part of a PTS–receptor docking complex and interacts with many peroxins, Monique Johnson, William Snyder, Joan Lin-Cereghino, Marten Veenhuis, Suresh Subramani, and James Cregg

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New selectable marker/auxotrophic host strain combinations for molecular genetic manipulation of Pichia pastoris., Geoff P. Lin-Cereghino, Joan Lin-Cereghino, Anthony Sunga, Monique Johnson, May Lim, Martina Gleeson, and James Cregg

Submissions from 2000

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Recombinant Protein Expression in Pichia pastoris, James Cregg, Joan Lin-Cereghino, Jianying Shi, and David Higgins

Ecuadorian Birds: Nesting records and egg descriptions from a lowland tropical rainforest, Ryan I. Hill and H. F. Greeney

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Heterologous protein expression in the methylotrophic yeast Pichia pastoris, Joan Lin-Cereghino and James Cregg

Submissions from 1999

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1,4-Benzoquinone Reductase from Phanerochaete chrysosporium: cDNA Cloning and Regulation of Expression, Lakshmi Akileswaran, Barry Brock, Joan Lin-Cereghino, and Michael Gold

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Positive Selection of Novel Peroxisome Biogenesis-Defective Mutants of the Yeast Pichia pastoris, Monique A. Johnson, Hans R. Waterham, Galyna P. Ksheminska, Liubov R. Fayura, Joan Lin-Cereghino, Oleh V. Stasyk, Marten Veenhuis, Aleksander R. Kulachkovsky, Andrei A. Sibirny, and James Cregg

Submissions from 1997

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Endosome to Golgi Retrieval of the Vacuolar Protein Sorting Receptor, Vps10p, Requires the Function of the VPS29, VPS30, and VPS35 Gene Products, Matthew N. J. Seaman, Eric G. Marcusson, Joan Lin-Cereghino, and Scott D. Emr

Submissions from 1995

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The cytoplasmic tail domain of the vacuolar protein sorting receptor Vps10p and a subset of VPS gene products regulate receptor stability, function, and localization, Joan Lin-Cereghino, Eric G. Marcusson, and Scott D. Emr

Submissions from 1994

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Isolation and Characterization of DNA-Binding Mutants of a Plasmid Replication Initiation Protein Utilizing an in Vivo Binding Assay, Joan Lin-Cereghino, Donald R. Helinski, and Aresa E. Toukdarian

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The sorting receptor for yeast vacuolar carboxypeptidase Y is encoded by the VPS10 gene, Eric Marcusson, Bruce Horazdovsky, Joan Lin-Cereghino, Editte Gharakhanian, and Scott Emr

Submissions from 1993

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The essentiality of the three carboxy-terminal amino acids of the plasmid RK2 replication initiation protein TrfA for DNA-binding and replication activity, Joan Lin-Cereghino and Donald R. Helinski

Submissions from 1992

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Analysis of mutations in trfA, the replication initiation gene of the broad-host-range plasmid RK2, Joan Lin-Cereghino and Donald R. Helinski

Submissions from 1989

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Cellular gene expression in papillomas of the choroid plexus from transgenic mice that express the simian virus 40 large T antigen, Jeffrey R. Marks, Joan Lin-Cereghino, Philip Hinds, Douglas Miller, and Arnold J. Levine

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Utilization of luciferase fusion genes to monitor differential regulation of phytohemagglutinin and phaseolin promoters in transgenic tobacco, C. D. Riggs, D. C. Hunt, Joan Lin-Cereghino, and M. J. Chrispeels

Submissions from 1988

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Neutral amino acid transport systems in animal cells: potential targets of oncogene action and regulators of cellular growth, Milton H. Saier Jr., Gregory A. Daniels, Paula Boerner, and Joan Lin-Cereghino

Submissions from 1905

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On Regioselectivity of Aldol Condensation of Aromatic Aldehydes with Borate Complex of Acetylacetone, Val V. Martichonok, Peter K. Chiang, Padraick J. Dornbush, and Kirkwood M. Land