Part of the Genetics and Genomics Commons

Works in Genetics and Genomics

2023

Exploring the Interactions Between UBLs and E2s: A Novel Approach for Designing Specific E2 Inhibitors, Aneri Mehta, Cai Lu, Jan Estandarte, Spring 2023 CHEM 157 Class
Pacific Undergraduate Research and Creativity Conference (PURCC)

Detection of Endoplasmic Reticulum Stress in Zebrafish., Kleo Hong, Shrey Shah, Bridgette Humphreys, Stephanie Akhigbe Egberuare, Joseph Merle
Pacific Undergraduate Research and Creativity Conference (PURCC)

2022

Overcoming Obstacles in Protein Expression in the Yeast Pichia pastoris: Interviews of Leaders in the Pichia Field, Zoe Ingram, Abha Patkar, Dahoon Oh, Kevin K. Zhang, Christina Chung, Joan Lin-Cereghino, Geoff P. Lin-Cereghino
Joan Lin-Cereghino

Development of Cloning Vehicles for Expression of Gc-MAF in Yeast, Tammy Tran, Seohyun Lee, Jane Yu, Wilson Wu
Pacific Undergraduate Research and Creativity Conference (PURCC)

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Proteomic Analysis of the Expression of MaSp1 Dragline Silk Protein in E. coli, Sophie Rae Pazzo, Rajan Amit Patel, Kamrin Athwal, Edward Kim
Pacific Undergraduate Research and Creativity Conference (PURCC)

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Evaluation of a pBAD based promoter for control of gene expression in Variovorax paradoxus, Trisha M. Dinh, Annie Lin, Juna Hwang, Naomi C. Nguyen
Pacific Undergraduate Research and Creativity Conference (PURCC)

Evaluation of a Tet-On promoter for control of gene expression in Variovorax paradoxus, Juna Hwang, Naomi C. Nguyen, Trisha M. Dinh, Annie Lin
Pacific Undergraduate Research and Creativity Conference (PURCC)

Structure-Function Characterization of Zebrafish GADD34 and CReP, Alice Thuc Truong, Ciera Wroten, Jessica Woo, Jey Kim, Joshua Tao, Kleo Hong, Twisha Patel
Pacific Undergraduate Research and Creativity Conference (PURCC)

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Creating a video about how to perform a spot western assay to identify successful expression strains of the yeast Pichia pastoris, Andrew J. Lim, Priscilla Hu, Kevin Zhang, Eddie Suh, Patrick Delgado
Pacific Undergraduate Research and Creativity Conference (PURCC)

CPF1-BASED CRISPR GENOME EDITING IN THE CYANOBACTERIUM N. PUNCTIFORME, Soohan Woo
University of the Pacific Theses and Dissertations

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2021

Overcoming Obstacles in Protein Expression in the Yeast Pichia pastoris: Interviews of Leaders in the Pichia Field, Zoe Ingram, Abha Patkar, Dahoon Oh, Kevin K. Zhang, Christina Chung, Joan Lin-Cereghino, Geoff P. Lin-Cereghino
Pacific Journal of Health

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2020

Announcing the "Pacific Journal of Health", David M. Ojcius, Michele Gibney
David M. Ojcius

Serotonin Induces Female Swimming Behavior in Sexually Dimorphic Ostracod Crustaceans, Sonya Ahmadyar, Tara Tran
Pacific Undergraduate Research and Creativity Conference (PURCC)

Regulation of GADD34 and CReP mRNA Expression in the Unfolded Protein Response, Krithika Giresh
Pacific Undergraduate Research and Creativity Conference (PURCC)

Barcoding Adelpha immatures to understand host breadth, Connor P. Soderstrom, Elizabeth Song, Rylie Towne
Pacific Undergraduate Research and Creativity Conference (PURCC)

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2019

Announcing the "Pacific Journal of Health", David M. Ojcius, Michele Gibney
Michele Gibney

Announcing the "Pacific Journal of Health", David M. Ojcius, Michele Gibney
Pacific Research & Scholarship Day

Cloning and characterization of the Pichia pastoris MET2 gene as a selectable marker, Der Thor, See Xiong, Claire C. Orazem, An-Chun Kwan, James Cregg, Joan Lin-Cereghino, Geoff P. Lin-Cereghino
Joan Lin-Cereghino

Direct selection of Pichia pastoris expression strains using new G418 resistance vectors, Joan Lin-Cereghino, Matthew Hashimoto, Allison Moy, James Castelo, Claire Orazem, Peter Kuo, See Xiong, Vishal Gandhi, Christopher Hatae, Alex Chan, Geoff P. Lin-Cereghino
Joan Lin-Cereghino

Isolation and Characterization of DNA-Binding Mutants of a Plasmid Replication Initiation Protein Utilizing an in Vivo Binding Assay, Joan Lin-Cereghino, Donald R. Helinski, Aresa E. Toukdarian
Joan Lin-Cereghino

New selectable marker/auxotrophic host strain combinations for molecular genetic manipulation of Pichia pastoris., Geoff P. Lin-Cereghino, Joan Lin-Cereghino, Anthony Sunga, Monique Johnson, May Lim, Martina Gleeson, James Cregg
Joan Lin-Cereghino

Mxr1p, a Key Regulator of the Methanol Utilization Pathway and Peroxisomal Genes in Pichia pastoris, Geoff P. Lin-Cereghino, Laurie Godfrey, Bernard J. de la Cruz, Sabrina Johnson, Samone Khuongsathiene, Ilya Tolstorukov, Mingda Yan, Joan Lin-Cereghino, Marten Veenhuis, Suresh Subramani, James Cregg
Joan Lin-Cereghino

Positive Selection of Novel Peroxisome Biogenesis-Defective Mutants of the Yeast Pichia pastoris, Monique A. Johnson, Hans R. Waterham, Galyna P. Ksheminska, Liubov R. Fayura, Joan Lin-Cereghino, Oleh V. Stasyk, Marten Veenhuis, Aleksander R. Kulachkovsky, Andrei A. Sibirny, James Cregg
Joan Lin-Cereghino

The effect of α-mating factor secretion signal mutations on recombinant protein expression in Pichia pastoris., Geoff P. Lin-Cereghino, Carolyn Stark, Daniel Kim, Jennifer Chang, Nadia Shaheen, Hansel Poerwanto, Kimiko Agari, Pachai Moua, Lauren Low, Namphuong Tran, Amy Huang, Maria Nattestad, Kristin Oshiro, John Chang, Archana Chavan, Jerry Tsai, Joan Lin-Cereghino
Joan Lin-Cereghino

Promoter library designed for fine-tuned gene expression in Pichia pastoris, Franz S. Hartner, Claudia Ruth, David Langenegger, Sabrina N. Johnson, Petr Hyka, Geoff P. Lin-Cereghino, Joan Lin-Cereghino, Karin Kovar, James Cregg, Anton Glieder
Joan Lin-Cereghino

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The sorting receptor for yeast vacuolar carboxypeptidase Y is encoded by the VPS10 gene, Eric Marcusson, Bruce Horazdovsky, Joan Lin-Cereghino, Editte Gharakhanian, Scott Emr
Joan Lin-Cereghino

Notch signaling and lateral inhibition, Ajna S. Rivera
Pacific Open Images

Regulatory Linkage, Ajna S. Rivera
Pacific Open Images

The Raspopovic et al. model for digit specification, Ajna S. Rivera
Pacific Open Images

Hox 13 modifies the Turing model wavelength to produce unbranched digits, Ajna S. Rivera
Pacific Open Images

Positive and Purifying Selection, Ajna S. Rivera
Pacific Open Images

Gap gene mutations, Ajna S. Rivera, Amanda Lo
Pacific Open Images

Model for Tetrapod Limb Development, Ajna S. Rivera
Pacific Open Images

Increasing organismal and genetic complexity, Ajna S. Rivera
Pacific Open Images

Enhancer evolution, Ajna S. Rivera, Amanda Lo
Pacific Open Images

Hox and Wnt patterning in Cnidaria, Ajna S. Rivera, Amanda Lo
Pacific Open Images

The organizer's role in germ layer specification in Xenopus, Ajna S. Rivera
Pacific Open Images

Even-skipped regulation, Ajna S. Rivera, Lo Amanda
Pacific Open Images

Increasing complexity, Ajna S. Rivera
Pacific Open Images

Bicoid models, Ajna S. Rivera
Pacific Open Images

Translational Regulation, Ajna S. Rivera
Pacific Open Images

Fertilization, Ajna S. Rivera
Pacific Open Images

Cortical rotation, Ajna S. Rivera
Pacific Open Images

Transcriptional Regulation, Ajna S. Rivera
Pacific Open Images

Positional Information from a gradient, Ajna S. Rivera
Pacific Open Images

2018

Zebrafish Rho kinase is required for proper midline development, Skyler Chu
Pacific Undergraduate Research and Creativity Conference (PURCC)

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Regulation of the Unfolded Protein Response by GADD34 and CReP, Louis Chen, Johnathan Ha, Jisoo Kim, John Lee, David Lotfizadeh, Ivy Lu, Jason Tran, Diana Wong
Pacific Undergraduate Research and Creativity Conference (PURCC)

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Fish Forensics: Exposing Discrepancies in Contemporary Species of Sculpin, Seonggon (Steve) Yoo, Wonjoon (John) Choi
Pacific Undergraduate Research and Creativity Conference (PURCC)

Sculpin Out a Fishy Situation: Bioinformatic Analysis of Fish in the McCloud River, California, Erica Chien, Jamie Lam
Pacific Undergraduate Research and Creativity Conference (PURCC)

Comparing McCloud River Sculpins’ FST using genomics and bioinformatics, Young Soo Choi, Peter Park
Pacific Undergraduate Research and Creativity Conference (PURCC)

Purification of Dragline Silk Proteins to Explore Effects of Silk Components on Wound Healing, Su Jeong Oh, Dilpreet Basram, Elaine Chu, Patricia Ilas, Alycia Chung, Caroline Hang, Soyeon Shim, Ivy Hang, Ike Kwon, Hayoung Kim
Pacific Undergraduate Research and Creativity Conference (PURCC)

Investigation of Aminoglycosides Binding to G-Quadruplex DNA Using the FID Assay, Charlie Lin, Eileen Rad, Ethan D. Trinh, Jerry Ye
Pacific Undergraduate Research and Creativity Conference (PURCC)

Scaling problems, Ajna S. Rivera
Pacific Open Images

Central Dogma of Molecular Biology, Ajna S. Rivera, Kristina Vu
Pacific Open Images

2017

Bacterial Expression of Fasciclin: A Key Component of Dragline Silk, Kelvin Lal, Jeongsik Arthur Oh, Sumi Hwang, Brian Park
Pacific Undergraduate Research and Creativity Conference (PURCC)

The Evolution and Function of the CPI-17 Family of Phosphatase Inhibitors in Zebrafish, Irene Lang
Pacific Undergraduate Research and Creativity Conference (PURCC)

Molecular regulation of stem cell behavior during tissue repair and cancer formation, Nestor J. Oviedo
Science Seminar Series

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2016

Design of novel ion channel modulators, Vladimir Yarov-Yarovoy
Science Seminar Series

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Epigenetic Tumor Response to Hypoxia: An Epimutation Pattern and a Method of Multi Targeted Epigenetic Therapy (MTET), M. A. Nezami, Steven Hager, Jessica Garner
Jessica Garner

2013

The effect of α-mating factor secretion signal mutations on recombinant protein expression in Pichia pastoris., Geoff P. Lin-Cereghino, Carolyn Stark, Daniel Kim, Jennifer Chang, Nadia Shaheen, Hansel Poerwanto, Kimiko Agari, Pachai Moua, Lauren Low, Namphuong Tran, Amy Huang, Maria Nattestad, Kristin Oshiro, John Chang, Archana Chavan, Jerry Tsai, Joan Lin-Cereghino
College of the Pacific Faculty Articles

2008

Promoter library designed for fine-tuned gene expression in Pichia pastoris, Franz S. Hartner, Claudia Ruth, David Langenegger, Sabrina N. Johnson, Petr Hyka, Geoff P. Lin-Cereghino, Joan Lin-Cereghino, Karin Kovar, James Cregg, Anton Glieder
College of the Pacific Faculty Articles

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Direct selection of Pichia pastoris expression strains using new G418 resistance vectors, Joan Lin-Cereghino, Matthew Hashimoto, Allison Moy, James Castelo, Claire Orazem, Peter Kuo, See Xiong, Vishal Gandhi, Christopher Hatae, Alex Chan, Geoff P. Lin-Cereghino
College of the Pacific Faculty Articles

Evidence that aciniform silk and minor ampullate silk are major constituents of wrapping silk from the black widow, Ryan C. Reza
University of the Pacific Theses and Dissertations

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2006

Mxr1p, a Key Regulator of the Methanol Utilization Pathway and Peroxisomal Genes in Pichia pastoris, Geoff P. Lin-Cereghino, Laurie Godfrey, Bernard J. de la Cruz, Sabrina Johnson, Samone Khuongsathiene, Ilya Tolstorukov, Mingda Yan, Joan Lin-Cereghino, Marten Veenhuis, Suresh Subramani, James Cregg
College of the Pacific Faculty Articles

2005

Cloning and characterization of the Pichia pastoris MET2 gene as a selectable marker, Der Thor, See Xiong, Claire C. Orazem, An-Chun Kwan, James Cregg, Joan Lin-Cereghino, Geoff P. Lin-Cereghino
College of the Pacific Faculty Articles

2001

New selectable marker/auxotrophic host strain combinations for molecular genetic manipulation of Pichia pastoris., Geoff P. Lin-Cereghino, Joan Lin-Cereghino, Anthony Sunga, Monique Johnson, May Lim, Martina Gleeson, James Cregg
College of the Pacific Faculty Articles

1999

Positive Selection of Novel Peroxisome Biogenesis-Defective Mutants of the Yeast Pichia pastoris, Monique A. Johnson, Hans R. Waterham, Galyna P. Ksheminska, Liubov R. Fayura, Joan Lin-Cereghino, Oleh V. Stasyk, Marten Veenhuis, Aleksander R. Kulachkovsky, Andrei A. Sibirny, James Cregg
College of the Pacific Faculty Articles

1994

The sorting receptor for yeast vacuolar carboxypeptidase Y is encoded by the VPS10 gene, Eric Marcusson, Bruce Horazdovsky, Joan Lin-Cereghino, Editte Gharakhanian, Scott Emr
College of the Pacific Faculty Articles

Isolation and Characterization of DNA-Binding Mutants of a Plasmid Replication Initiation Protein Utilizing an in Vivo Binding Assay, Joan Lin-Cereghino, Donald R. Helinski, Aresa E. Toukdarian
College of the Pacific Faculty Articles